<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN" "http://www.w3.org/TR/html4/strict.dtd"><style type="text/css">pre{font-size:10pt; font-family: monospace ; white-space: pre; }</style><pre>dir_all_orthomcl.txt/ORTHOMCL9478.aln .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770......<span style="background-color: lightcyan">AT4G30200.1 -----------------MSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLLKIVSEKNSG----ECEGKKR---DSDCLPIQRNTKRQRKVDNPSRYVIPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQSE--GCCFYCVSCGKANSLLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLTGLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEG-----ANCSSAVERSVSPLTNCSTLSSNPSSVEAESNNDYIVP----KKPSSKNEDNNSPSVDES--AAKRMKRTTDS--DIVQIEKDVEQIVLLDDEE--QEAVLDKT-----------ESETPVVVTTKS-LVGNRNSSDASLP-----ITPFRSDEIKNRQARIEISMKDNCN-------------NGD--------HSAN--------------GGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH</span><font color="red">AT4G30200.1(Ath:add_237) </font>-----------------....................................................................----.......---................................................................................................................................--........................................................................................................................................................................................................................................-----......................................----..................--...........--...................--........-----------............-.....<a name="Ath:add_237"><span style="background-color: pink" title="id:Ath:add_237 type: original:Ath:2851 match:Ath:add_237"><font color="black">N</font><font color="blue"><B>S</B></font><font color="blue"><B>S</B></font><font color="black">D</font><font color="black">A</font><font color="black">S</font><font color="black">L</font><font color="black">P</font>-----<font color="black">I</font><font color="black">T</font><font color="black">P</font><font color="black">F</font><font color="black">R</font></span></a>....................-------------...--------....--------------...................................................................................................<span style="background-color: lightyellow">LOC_Os02g05840.1 MDPPYAGVPIDPAKCRLMSVDEKRELVRELSKRPESAPDKLQSWSRREIVEILCADLGRERKYTGLSKQRMLEYLFRVVTGKSSGGGVVEHVQEKEPTPEPNTANHQSPAKRQRKSDNPSRLPIVAS----------SPTTEIPRPASNARFCHNLACRATLNPEDKFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDSCVFSCHLECALKDGRTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARRLDVLCHRIFLSHKILVSTEKYLVLHEIVDTAMKKLEAEVGPISGVAN-MGRGIVSRLAVGAEVQKLCARAIETMESLFCG--------SPSNLQFQRSRMIP-SNFVKFEAITQTSVTVVLDLGPILAQ-DVTCFNVWHRVAATGSFSSSPTGIILAPLKTLVVTQLVPATSYIFKVVAFSNYKEFGSWEAKMKTSCQKEVDLKGLMPGGSGLDQNNGSPKANSGGQSDPSSEGVDSNNNTAVYADLNKSPESDFEYCENPEILDSDKASHHPNEPTNNSQSMPMVVARVTEVSGLEEAPGLSASALDEEPNSAVQTQLLRESSNSMEQNQRSEVPGSQDASNAPAGNEVVIVPPRYSGSIPPTAPRYMENGKDISGRSLKAKPGDNILQNGSSKPEREPGNSSNKRTSGKCEEIGHKDGCPEASYEYCVKVVRWLECEGYIETNFRVKFLTWYSLRATPHDRKIVSVYVNTLIDDPVSLSGQLADTFSEAIYSKRPPS--------VRSGFCMELWH</span><font color="red">LOC_Os02g05840.1(Osa:2057) </font>...............................................................................................................................----------..........................................................................................................................................................................-................................--------..............-..........................-..........................................................................<a name="Osa:2057"><span style="background-color: orange" title="id:Osa:2057 type: original:Osa:2057 match:not_found"><font color="black">G</font><font color="black">L</font><font color="black">M</font><font color="black">P</font><font color="black">G</font><font color="black">G</font><font color="black">S</font><font color="black">G</font><font color="black">L</font><font color="black">D</font><font color="black">Q</font><font color="black">N</font><font color="black">N</font><font color="black">G</font><font color="green"><B>S</B></font><font color="black">P</font><font color="black">K</font></span></a>......................................................................................................................................................................................................................................................................................--------...........<font color="red">LOC_Os02g05840.1(Osa:2058) </font>...............................................................................................................................----------..........................................................................................................................................................................-................................--------..............-..........................-..........................................................................<a name="Osa:2058"><span style="background-color: orange" title="id:Osa:2058 type: original:Osa:2058 match:not_found"><font color="black">G</font><font color="black">L</font><font color="black">M</font><font color="black">P</font><font color="black">G</font><font color="black">G</font><font color="black">S</font><font color="black">G</font><font color="black">L</font><font color="black">D</font><font color="black">Q</font><font color="black">N</font><font color="black">N</font><font color="black">G</font><font color="green"><B>S</B></font><font color="black">P</font><font color="black">K</font></span></a>......................................................................................................................................................................................................................................................................................--------...........<font color="green"><B>CONFIRMED</B></font><font color="blue"><B>AMBIGUOUS</B></font><span style="background-color: yellow">original with new_match</span><span style="background-color: orange">original without new_match</span><span style="background-color: pink">new_match</span><HR><B>Ath:add_237</B>species Ath, gene AT4G30200.1 peptide NSSDASLPITPFR, confirmed , ambiguous @S:2 S:3 type <B>new_match</B><a href="#Ath:add_237" target="new">ORTHOMCL9478::Ath AT4G30200.1::Ath:add_237</a>original::id Ath:2851, original::gene AT4G30200.2, gene::cluster no_clusternew_match::id Ath:add_237, original::gene AT4G30200.1, gene::cluster <a href="#Ath:add_237">ORTHOMCL9478::Ath AT4G30200.1::Ath:add_237</a><B>Osa:2057</B>species Osa, gene LOC_Os02g05840.1 peptide GLMPGGSGLDQNNGSPK, confirmed @S:15, ambiguous type <B>original</B><a href="#Osa:2057" target="new">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2057</a>original::id Osa:2057, original::gene LOC_Os02g05840.1, gene::cluster <a href="#Osa:2057">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2057</a>new_match::id not_found, original::gene , gene::cluster no_cluster<B>Osa:2058</B>species Osa, gene LOC_Os02g05840.1 peptide GLMPGGSGLDQNNGSPK, confirmed @S:15, ambiguous type <B>original</B><a href="#Osa:2058" target="new">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2058</a>original::id Osa:2058, original::gene LOC_Os02g05840.1, gene::cluster <a href="#Osa:2058">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2058</a>new_match::id not_found, original::gene , gene::cluster no_cluster<pre> <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN" "http://www.w3.org/TR/html4/strict.dtd"><style type="text/css">pre{font-size:10pt; font-family: monospace ; white-space: pre; }</style><pre>dir_all_orthomcl.txt/ORTHOMCL9478.aln .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770......<span style="background-color: lightcyan">AT4G30200.1 -----------------MSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLLKIVSEKNSG----ECEGKKR---DSDCLPIQRNTKRQRKVDNPSRYVIPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQSE--GCCFYCVSCGKANSLLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLTGLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEG-----ANCSSAVERSVSPLTNCSTLSSNPSSVEAESNNDYIVP----KKPSSKNEDNNSPSVDES--AAKRMKRTTDS--DIVQIEKDVEQIVLLDDEE--QEAVLDKT-----------ESETPVVVTTKS-LVGNRNSSDASLP-----ITPFRSDEIKNRQARIEISMKDNCN-------------NGD--------HSAN--------------GGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH</span><font color="red">AT4G30200.1(Ath:add_237) </font>-----------------....................................................................----.......---................................................................................................................................--........................................................................................................................................................................................................................................-----......................................----..................--...........--...................--........-----------............-.....<a name="Ath:add_237"><span style="background-color: pink" title="id:Ath:add_237 type: original:Ath:2851 match:Ath:add_237"><font color="black">N</font><font color="blue"><B>S</B></font><font color="blue"><B>S</B></font><font color="black">D</font><font color="black">A</font><font color="black">S</font><font color="black">L</font><font color="black">P</font>-----<font color="black">I</font><font color="black">T</font><font color="black">P</font><font color="black">F</font><font color="black">R</font></span></a>....................-------------...--------....--------------...................................................................................................<span style="background-color: lightyellow">LOC_Os02g05840.1 MDPPYAGVPIDPAKCRLMSVDEKRELVRELSKRPESAPDKLQSWSRREIVEILCADLGRERKYTGLSKQRMLEYLFRVVTGKSSGGGVVEHVQEKEPTPEPNTANHQSPAKRQRKSDNPSRLPIVAS----------SPTTEIPRPASNARFCHNLACRATLNPEDKFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDSCVFSCHLECALKDGRTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARRLDVLCHRIFLSHKILVSTEKYLVLHEIVDTAMKKLEAEVGPISGVAN-MGRGIVSRLAVGAEVQKLCARAIETMESLFCG--------SPSNLQFQRSRMIP-SNFVKFEAITQTSVTVVLDLGPILAQ-DVTCFNVWHRVAATGSFSSSPTGIILAPLKTLVVTQLVPATSYIFKVVAFSNYKEFGSWEAKMKTSCQKEVDLKGLMPGGSGLDQNNGSPKANSGGQSDPSSEGVDSNNNTAVYADLNKSPESDFEYCENPEILDSDKASHHPNEPTNNSQSMPMVVARVTEVSGLEEAPGLSASALDEEPNSAVQTQLLRESSNSMEQNQRSEVPGSQDASNAPAGNEVVIVPPRYSGSIPPTAPRYMENGKDISGRSLKAKPGDNILQNGSSKPEREPGNSSNKRTSGKCEEIGHKDGCPEASYEYCVKVVRWLECEGYIETNFRVKFLTWYSLRATPHDRKIVSVYVNTLIDDPVSLSGQLADTFSEAIYSKRPPS--------VRSGFCMELWH</span><font color="red">LOC_Os02g05840.1(Osa:2057) </font>...............................................................................................................................----------..........................................................................................................................................................................-................................--------..............-..........................-..........................................................................<a name="Osa:2057"><span style="background-color: orange" title="id:Osa:2057 type: original:Osa:2057 match:not_found"><font color="black">G</font><font color="black">L</font><font color="black">M</font><font color="black">P</font><font color="black">G</font><font color="black">G</font><font color="black">S</font><font color="black">G</font><font color="black">L</font><font color="black">D</font><font color="black">Q</font><font color="black">N</font><font color="black">N</font><font color="black">G</font><font color="green"><B>S</B></font><font color="black">P</font><font color="black">K</font></span></a>......................................................................................................................................................................................................................................................................................--------...........<font color="red">LOC_Os02g05840.1(Osa:2058) </font>...............................................................................................................................----------..........................................................................................................................................................................-................................--------..............-..........................-..........................................................................<a name="Osa:2058"><span style="background-color: orange" title="id:Osa:2058 type: original:Osa:2058 match:not_found"><font color="black">G</font><font color="black">L</font><font color="black">M</font><font color="black">P</font><font color="black">G</font><font color="black">G</font><font color="black">S</font><font color="black">G</font><font color="black">L</font><font color="black">D</font><font color="black">Q</font><font color="black">N</font><font color="black">N</font><font color="black">G</font><font color="green"><B>S</B></font><font color="black">P</font><font color="black">K</font></span></a>......................................................................................................................................................................................................................................................................................--------...........<font color="green"><B>CONFIRMED</B></font><font color="blue"><B>AMBIGUOUS</B></font><span style="background-color: yellow">original with new_match</span><span style="background-color: orange">original without new_match</span><span style="background-color: pink">new_match</span><HR><B>Ath:add_237</B>species Ath, gene AT4G30200.1 peptide NSSDASLPITPFR, confirmed , ambiguous @S:2 S:3 type <B>new_match</B><a href="#Ath:add_237" target="new">ORTHOMCL9478::Ath AT4G30200.1::Ath:add_237</a>original::id Ath:2851, original::gene AT4G30200.2, gene::cluster no_clusternew_match::id Ath:add_237, original::gene AT4G30200.1, gene::cluster <a href="#Ath:add_237">ORTHOMCL9478::Ath AT4G30200.1::Ath:add_237</a><B>Osa:2057</B>species Osa, gene LOC_Os02g05840.1 peptide GLMPGGSGLDQNNGSPK, confirmed @S:15, ambiguous type <B>original</B><a href="#Osa:2057" target="new">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2057</a>original::id Osa:2057, original::gene LOC_Os02g05840.1, gene::cluster <a href="#Osa:2057">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2057</a>new_match::id not_found, original::gene , gene::cluster no_cluster<B>Osa:2058</B>species Osa, gene LOC_Os02g05840.1 peptide GLMPGGSGLDQNNGSPK, confirmed @S:15, ambiguous type <B>original</B><a href="#Osa:2058" target="new">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2058</a>original::id Osa:2058, original::gene LOC_Os02g05840.1, gene::cluster <a href="#Osa:2058">ORTHOMCL9478::Osa LOC_Os02g05840.1::Osa:2058</a>new_match::id not_found, original::gene , gene::cluster no_cluster<pre> ORTHOMCL9478